Predicting the future may be beyond our grasp, but what about predicting disease progression? Researchers in Japan have delved into the human genome to investigate a predictive tool for the progression of rheumatoid arthritis (RA), an inflammatory autoimmune disease showing progressive joint damage.
In a new study published in Arthritis & Rheumatology, researchers led by Tokyo Medical and Dental University (TMDU) used data from a genome-wide association study (GWAS) of RA susceptibility to construct a polygenic risk score (PRS). They evaluated the PRS’s ability to predict radiographic progression—progressive anatomical damage assessed by radiographic imaging—in individuals with RA.
In a GWAS, genomic analysis of a group of individuals is performed to identify genetic variants that may be associated with a certain trait or disease. A PRS can be generated from a GWAS dataset and represents an individual’s risk of developing a specific disease based on a summation of the genetic variants associated with that disease. Previous studies have identified genetic factors associated with radiographic progression of RA, including the presence of anti-citrullinated protein antibodies (ACPAs) and variants located in the human leukocyte antigen (HLA) region of the human chromosome that contribute to regulating the immune system. However, the predictive accuracy of these factors is not robust. Therefore, the TMDU-led research team set out to evaluate the ability of the PRS to predict radiographic progression in people with RA.
“We generated the PRS using summary statistics from a GWAS analysis of RA susceptibility and evaluated radiographic joint damage retrospectively from patient medical records,” explains lead author Suguru Honda.
The researchers then conducted statistical analysis to assess whether there is an association between PRS and severity of radiographic progression. Additionally, the research team performed a multivariable analysis to evaluate the association between radiographic progression and the combination of PRS and other factors such as sex, age of onset, and presence of ACPAs or HLA region variants.
“Our analyses revealed an association between PRS and radiographic progression,” says senior author Yuta Kochi. “The PRS significantly differed between severe and non-severe progression groups.”
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